SUPR
SNIC 2017/21-Forsberg
Dnr:

sens2017134

Type:

SNIC SENS

Principal Investigator:

Lars Forsberg

Affiliation:

Uppsala universitet

Start Date:

2018-01-23

End Date:

2025-02-01

Primary Classification:

30107: Medical Genetics

Allocation

  • Castor /proj at UPPMAX: 24000 GiB
  • Cygnus /proj at UPPMAX: 24000 GiB
  • Castor /proj/nobackup at UPPMAX: 10000 GiB
  • Cygnus /proj/nobackup at UPPMAX: 10000 GiB
  • Bianca at UPPMAX: 10 x 1000 core-h/month

Abstract

We are currently generating large amount of data in two NGS projects. Since Milou is closing we need a project on Bianca. We also want to move the data from our current milou project b2016310 to the bianca project. (From previous project):We will primarily analyze large-scale DNA and RNA sequencing dataset in several large cohorts. These includes projects performed by the PI in cancer genetics and other aging related phenotypes. For example, we will analyze WGS data from aging projects as well as transcriptome data from men affected with LOY (loss of chromosome Y).