NAISS
SUPR
NAISS Projects
SUPR
Large scale single cell sequencing analysis of vascular cells
Dnr:

NAISS 2026/4-1667

Type:

NAISS Small

Principal Investigator:

Liqun He

Affiliation:

Uppsala universitet

Start Date:

2026-09-22

End Date:

2027-10-01

Primary Classification:

10610: Bioinformatics and Computational Biology (Methods development to be 10203)

Webpage:

Allocation

Abstract

Interest in vascular cells has increased steadily in recent years, as their role in development and disease have begun to be elucidated. In this project, we perform a deep analysis of the transcriptome profiles of different vascular cells obtained from a variety of experiments, including different time points and different conditions. Our analysis will shed new light on the molecular functions in the vasculature. We mainly perform computation work on sequencing data analysis, including apply single cell foundation models, which need the GPU resources. The project is belong to department of Immunology, Genetic and Pathology in Uppsala University.