Long-read sequencing
Dnr:
NAISS 2026/4-1045
Type:
NAISS Small
Principal Investigator:
Lars Feuk
Affiliation:
Uppsala universitet
Start Date:
2026-06-09
End Date:
2027-07-01
Primary Classification:
30115: Medical Epigenetics and Epigenomics
Allocation
- Cygnus /proj at UPPMAX: 3000 GiB
- Cygnus /proj/nobackup at UPPMAX: 3000 GiB
- Bianca at UPPMAX: 4 x 1000 core-h/month
Abstract
We will continue to run analysis of long-read sequencing data. Details are outlined in the report submitted 2026-05-29 for the project. The project will entail mapping, de novo assembly, variant calling, variant interpretation and variant filtering. We will also start to explore tools to analyze methylation information from the long-read sequencing data.