NAISS
SUPR
NAISS Projects
SUPR
Sphingomonas genomics, transcriptomics, and plant transcriptomics
Dnr:

NAISS 2025/22-1073

Type:

NAISS Small Compute

Principal Investigator:

Derek Lundberg

Affiliation:

Sveriges lantbruksuniversitet

Start Date:

2025-09-15

End Date:

2026-10-01

Primary Classification:

40402: Genetics and Breeding in Agricultural Sciences

Webpage:

Allocation

Abstract

Recent findings show that certain microbes including Sphingomonas can improve plants’ tolerance to biotic and abiotic stresses and promote growth. Most Sphingomonas genes involved into biotic interactions with plants remain uncharacterized. This project aims to elucidate how different local Sphingomonas strains interact with three different model plants A. thaliana, barley and poplar under different conditions. We will conduct genomics, plant and bacterial transcriptomic, and amplicon analysis using primarily major mainstream bioinformatics tools.