SWEEPICS microscope benchmarking
Dnr:
NAISS 2025/22-706
Type:
NAISS Small Compute
Principal Investigator:
Jianjiang Hu
Affiliation:
Karolinska Institutet
Start Date:
2025-06-09
End Date:
2026-07-01
Primary Classification:
20603: Medical Imaging
Webpage:
Allocation
- Centre Storage at NSC: 500 GiB
- Tetralith at NSC: 7 x 1000 core-h/month
Abstract
The SWEEPICS project is an EU project which will develop a new type of microscope. I will benchmark the SWEEPIC microscope towards state of art light microscopes, including the light sheet microscope. The light sheet microscope will generate a large amount of single images that need to be stitched. I will need the HPC to accelerate the image-stitching process.