Diverse microorganisms can execute one or more steps in denitrification, during which nitrate
or nitrite is successively reduced into nitric oxide, nitrous oxide, and ultimately
dinitrogen. Many of the best-characterized denitrifiers are “complete” denitrifiers capable of
executing all steps in the process, but whether they dominate in natural communities and
what environmental factors drive the distribution of complete vs. partial denitrifiers remain
unclear and incomplete in a global context. To address this, we will conduct a comparative
analysis of denitrification genes in 48,284 genomes and assessed their environmental
distribution in 3,991 metagenomes and 1,700 metatranscriptomes covering all major biomes. We did the genomic and metagenomic analyses and need now to process the metratranscriptomes.