Single-cell methods development
Dnr:
NAISS 2024/22-1647
Type:
NAISS Small Compute
Principal Investigator:
Johan Henriksson
Affiliation:
Umeå universitet
Start Date:
2024-12-26
End Date:
2026-01-01
Primary Classification:
30401: Medical Biotechnology (focus on Cell Biology (incl. Stem Cell Biology), Molecular Biology, Microbiology, Biochemistry or Biopharmacy)
Webpage:
Allocation
Abstract
Our group develops new analysis methods for single-cell data. This includes RNA-seq, ATAC-seq, multiome, and new types of single-cell protocols being developed in the lab.
Our need for CPU varies tremendously, with a historic peak at 100k CPU hours/month. 5-10k CPU/month is a more realistic average, but we have had this limit before and hit the limit several times