This is a continuation of a proposal where we performed instance segmentation on 3D scan data which are tiff images from rat intestine track. We now extend the project to nerve cell data as well and much more tomography data.
The project will therefore continue with segmentation of glomeruli in rat data, segmenting nerve cells in tomography images but also segmenting microfossils in a joint project with biology. Once the images are segmented then we need to estimate important morphological quantities such as volume and other shape characteristics.
We already have setup the relevant machine learning algorithms and environment at Alvis and Cosmos but require extra storage in swestore for the processed data on that project.
We now also have a new project related to identification and analysis of microbiobial soil samples for analysis and the space requested is to be used for that data set as well.