Transcriptome analysis of retinoids and retinoblastoma

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Dnr:

NAISS 2024/22-1305

Type:

NAISS Small Compute

Principal Investigator:

Finn Hallböök

Affiliation:

Uppsala universitet

Start Date:

2024-10-08

End Date:

2025-11-01

Primary Classification:

30105: Neurosciences

Webpage:

https://www.igp.uu.se/forskning/neuroonkologi/finn-hallbook/

Allocation

Dardel at PDC: 3 x 1000 core-h/month
Rackham at UPPMAX: 3 x 1000 core-h/month

Abstract

We have established a model too study the early stages of retinoblastoma and need info on the transcriptomes at the initial stages of carcinogenesis. Sequencing transcriptome from bulk RNA from three samples of retina and retinoblastoma in chicken and human stem cell derived retinoids. We also will analyse populations of single cells with transcriptome sequenceing.