Estimation and testing of population split models
Dnr:
NAISS 2024/22-1193
Type:
NAISS Small Compute
Principal Investigator:
Per Sjödin
Affiliation:
Uppsala universitet
Start Date:
2024-09-13
End Date:
2025-10-01
Primary Classification:
10203: Bioinformatics (Computational Biology) (applications to be 10610)
Webpage:
Allocation
Abstract
This is to be able to run and evaluate our software (old and new) on empirical data. The software is for estimating parameters under a population genetic split model and simultaneously performing goodness of fit of these models. The input data consists of whole genome data from different individuals, either as vcfs or as bams.