SUPR
Restricted access published genome and imputation efforts
Dnr:

NAISS 2024/22-1088

Type:

NAISS Small Compute

Principal Investigator:

Federico Sanchez

Affiliation:

Uppsala universitet

Start Date:

2024-09-02

End Date:

2025-10-01

Primary Classification:

10609: Genetics (medical to be 30107 and agricultural to be 40402)

Webpage:

Allocation

Abstract

In this project, we will store and process restricted access published genome that obtained directly from authors. The data is mainly human high-coverage genomes. This is data is going to be used as a reference data for other projects being undertaken by the group. Depending on which projects are going to be used, some processing and filtering of the high coverage genomes by being different. Therefore it is important for the group to have access to no-publicly available data (granted specifically to our group) in a straightforward and easy access way, so it could be used accordingly.We will process this data, down sample it to different depth coverage under different scenarios.