SUPR
Microbial ecology and gut microbiome dynamics
Dnr:

NAISS 2024/22-836

Type:

NAISS Small Compute

Principal Investigator:

Erik Pelve

Affiliation:

Sveriges lantbruksuniversitet

Start Date:

2024-06-28

End Date:

2025-07-01

Primary Classification:

10606: Microbiology (medical to be 30109 and agricultural to be 40302)

Webpage:

Allocation

Abstract

Amplicon data, single cell genomics and metagenomics are utilized to explore the evolutionary and ecological dynamics of microorganisms from environmental samples and the gut microbiome of animals. Ongoing projects - Single cell genomics of archaea from the anoxic zone of the baltic sea - Correlation between bacteria in lake sediment with historical land use in a Swedish fresh water lake. - Metabolic annotation of korarchaea from an alkaline underwater hot spring - Effect on microbiota of including rye in dog feed - Analysis of rye diet on the human gut microbiome - Single cell data transcriptome analysis of breast cancer cells