SUPR
Spatial transcriptomics of the regenerating salamander heart
Dnr:

NAISS 2024/22-777

Type:

NAISS Small Compute

Principal Investigator:

Elif Eroglu

Affiliation:

Karolinska Institutet

Start Date:

2024-08-01

End Date:

2025-08-01

Primary Classification:

10604: Cell Biology

Webpage:

Allocation

Abstract

The contribution of the epicardium, the outermost layer of the heart, to cardiac regeneration has remained controversial due to a lack of suitable analytical tools. By combining genetic marker-independent lineage-tracing strategies with transcriptional profiling and loss-of-function methods, we previously reported that the epicardium of the highly regenerative salamander species Pleurodeles waltl has an intrinsic capacity to differentiate into cardiomyocytes. Following cryoinjury, CLDN6+ epicardium-derived cells appear at the lesion site, organize into honeycomb-like structures connected via focal tight junctions and undergo transcriptional reprogramming that results in concomitant differentiation into de novo cardiomyocytes. Ablation of CLDN6+ differentiation intermediates as well as disruption of their tight junctions impairs cardiac regeneration. Here, we combined our tight junction manipulations in the injured heart with spatial transcriptomics to explore the underlying molecular and cellular mechanisms. Salamanders constitute the evolutionarily closest species to mammals with an extensive ability to regenerate heart muscle and our results will help identify key targets to promote cardiac regeneration in mammals.