Bee population genomics

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Dnr:

NAISS 2024/22-492

Type:

NAISS Small Compute

Principal Investigator:

Matthew Webster

Affiliation:

Uppsala universitet

Start Date:

2024-05-01

End Date:

2025-05-01

Primary Classification:

10609: Genetics (medical to be 30107 and agricultural to be 40402)

Webpage:

http://www.imbim.uu.se/Research/+Genomics/Webster-Matthew/

Allocation

Klemming at PDC: 500 GiB
Crex 1 at UPPMAX: 128 GiB
Dardel at PDC: 8 x 1000 core-h/month
Rackham at UPPMAX: 8 x 1000 core-h/month

Abstract

This project is for analysis of next-gen sequencing data from several ongoing projects related to population genomics of bees. The project is funded by grants from Horizon Europe, Formas, VR, Naturvårdsverket and EPSS. It includes long-read genome assembly projects and population sequencing projects using short-read libraries from several bee species.