Metabarcoding taxonomy assignment
Dnr:
NAISS 2024/22-420
Type:
NAISS Small Compute
Principal Investigator:
Monika Winder
Affiliation:
Stockholms universitet
Start Date:
2024-04-10
End Date:
2025-05-01
Primary Classification:
10611: Ecology
Webpage:
Allocation
- Klemming at PDC: 500 GiB
- Crex 1 at UPPMAX: 128 GiB
- Dardel at PDC: 2 x 1000 core-h/month
- Rackham at UPPMAX: 2 x 1000 core-h/month
Abstract
The goal of this project is to identify species interactions of aquatic organisms. We will use the compute capacity to taxonomically assign 18S and CO1 barcodes that were sequenced at NGI.