Whole genome sequencing of rings in liposarcoma
Dnr:
sens2024004
Type:
NAISS SENS
Principal Investigator:
Fredrik Mertens
Affiliation:
Lunds universitet
Start Date:
2024-03-01
End Date:
2025-03-01
Primary Classification:
30108: Cell and Molecular Biology
Allocation
- Cygnus /proj/nobackup at UPPMAX: 8000 GiB
- Cygnus /proj at UPPMAX: 2000 GiB
- Bianca at UPPMAX: 10 x 1000 core-h/month
Abstract
The project is applied for in order to perform analyses of whole genome sequencing (WGS) data.
The project concerns WGS data on a sarcoma subtype that is characterized at the genetic level by ring chromosomes and amplification of segments in chromosome 12 and other chromosomes.
The current project aims to identify the structural variants and copy number changes associated with the ring chromosomes.