Transcriptomic definitions of breast cancer subtypes
Dnr:
NAISS 2023/22-1009
Type:
NAISS Small Compute
Principal Investigator:
Mats Nilsson
Affiliation:
Stockholms universitet
Start Date:
2023-10-04
End Date:
2024-11-01
Primary Classification:
20908: Medical Biotechnology
Webpage:
Allocation
- Klemming at PDC: 500 GiB
- Crex 1 at UPPMAX: 128 GiB
- Dardel at PDC: 5 x 1000 core-h/month
- Rackham at UPPMAX: 2 x 1000 core-h/month
- Snowy at UPPMAX: 1 x 1000 core-h/month
Abstract
The aim of this project is to establish single-cell transcriptomic malignant phenotype definitions for a specific type of breast cancer, via the analysis of merged and harmonized publicly available scRNA-seq datasets.