SUPR
Long read splice alignment
Dnr:

NAISS 2023/23-419

Type:

NAISS Small Storage

Principal Investigator:

Kristoffer Sahlin

Affiliation:

Stockholms universitet

Start Date:

2023-09-01

End Date:

2024-09-01

Primary Classification:

10203: Bioinformatics (Computational Biology) (applications to be 10610)

Webpage:

Allocation

Abstract

This is a computational project that concerns improving the accuracy of aligning long transcriptomic reads to genomes using new algorithmic techniques. Resources will be used for evaluating the proposed algorith to other methods. Preliminary results show great promise over other state-of-the-art algorithms, particularly in recovering small exons.