SUPR
Functional genetic variation in human populations
Dnr:

sens2021021

Type:

SNIC SENS

Principal Investigator:

Tuuli Lappalainen

Affiliation:

Kungliga Tekniska högskolan

Start Date:

2021-11-25

End Date:

2024-12-01

Primary Classification:

10609: Genetics (medical to be 30107 and agricultural to be 40402)

Allocation

  • Castor /proj at UPPMAX: 10000 GiB
  • Castor /proj/nobackup at UPPMAX: 10000 GiB
  • Cygnus /proj at UPPMAX: 10000 GiB
  • Cygnus /proj/nobackup at UPPMAX: 10000 GiB
  • Bianca at UPPMAX: 20 x 1000 core-h/month

Abstract

Professor Tuuli Lappalainen’s research group studies functional genetic variation in the human populations. We are particularly interested in characterizing how genetic variants affect the transcriptome, and how these cellular changes contribute to genetic risk for both common and rare diseases and traits. We analyze these questions both by computational integration analysis of large genomic and transcriptomic data sets and by experimental manipulation of human cell lines. The majority of our work involves analysis of protected human data, and we thus request a SNIC SENS project to provide resources for the lab’s work.