NGS method development and data analysis

SUPR uses JavaScript for certain functions. We cannot guarantee that you will be able to use the system with JavaScript disabled.

Dnr:

sens2020577

Type:

SNIC SENS

Principal Investigator:

Christian Lundtoft

Affiliation:

Uppsala universitet

Start Date:

2020-09-28

End Date:

2024-10-01

Primary Classification:

30107: Medical Genetics

Webpage:

Allocation

Castor /proj/nobackup at UPPMAX: 4096 GiB
Cygnus /proj/nobackup at UPPMAX: 4096 GiB
Castor /proj at UPPMAX: 1024 GiB
Cygnus /proj at UPPMAX: 1024 GiB
Bianca at UPPMAX: 4 x 1000 core-h/month

Abstract

This project will focus on method development for analysis of targeted sequencing data from patients with systemic inflammatory autoimmune diseases such as systemic lupus erythematosus (SLE) and healthy controls. The methods include analysis of HLA based on sequence data and analysis of structural variation/copy number variation.