SUPR
Biophysical data analysis and simulation
Dnr:

NAISS 2023/6-331

Type:

NAISS Medium Storage

Principal Investigator:

Emil Marklund

Affiliation:

Stockholms universitet

Start Date:

2023-12-22

End Date:

2025-01-01

Primary Classification:

10603: Biophysics

Allocation

Abstract

I have now started a position as Assistant Professor and SciLifeLab fellow at Stockholm Univsersity and would like to scale up our compute resources so that they are enough for my entire group. We will use these resources to perform different types of data analysis and simulations, for example for transcription factor - DNA binding and target search. We have previously shed light on how transcription factors manage to find their DNA targets (Marklund et al, Nature, 2020, https://doi.org/10.1038/s41586-020-2413-7) (Marklund et al, Science, 2022, https://doi.org/10.1126/science.abg7427). My group is expanding, and one main application for these resources is to perform image analysis of data coming from high-throughput biophysical binding measurements.